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Table 1 Advantages and disadvantages of mycobacterial EV (MEV) preparation methods

From: Establishment of minimum protein standards for Mycobacterium tuberculosis-derived extracellular vesicles through comparison of EV enrichment methods

Technique

Advantages

Disadvantages

Ultracentrifugation

• Straightforward process

• Inexpensive after centrifuge purchase

• Widely used

• Instrument dependent

• Low separation efficiency

• Vesicle aggregation/potential damage or lysis

• Published methods often lack details about instrumentation, rotors, and conditions

Density Gradient Ultracentrifugation

• High separation efficiency

• Inexpensive after centrifuge purchase

• Widely used

• Additional dimension of separation by density vs size only

• Time consuming

• Instrument dependent

• Complex process

• Low yield

• Vesicle aggregation

• Gradient medium removal required prior to analysis

• Published methods often lack details about instrumentation, rotors, and conditions

Size Exclusion Chromatography

• High separation efficiency

• Scalable

• Straightforward process

• Automation capable

• Preserves EV integrity

• Gentle

• Reagent and consumables cost

• Dilute output

• Can be challenging to define desired fractions based on overlap of EV markers and contaminants